Divergent pattern between phenotypic and genetic variation in Scots pine - Phenotype estimates of the genotyped individuals
type: Dataset
description: In this study, we sampled 54 Scots pine populations from the Norwegian coast over the Arctic Circle to western Russia covering 47.3 longitudes or more than 1/8th of the earth’s circumference, which represents the most comprehensive coverage of Northern Europe to date. We inferred variation in autumn phenology and dormancy progression from freeze hardiness tests conducted on >5000 seedlings, of which >900 seedlings from 24 populations were genotyped using genotyping-by-sequencing (GBS). Our main goal was to evaluate adaptive responses in Scots pine at phenotype and genotype levels. Evaluation of cold hardiness along environmental and geographical gradients would contribute to an understanding of the performance of these gradients for predicting freeze damage levels. The genotype data allow evaluation of genetic variance across landscapes and thus shed light on the degree of genetic-environmental association and the recolonization history of Scots pine in Scandinavia. The phenotypes of all genotyped individuals. Includes each individuals population number and seedlot
citation: Hall et al. 2021. Divergent pattern between phenotypic and genetic variation in Scots pine. Plant Communications
conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
conditions of access: info:eu-repo/semantics/openAccess
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: David Hall
date modified: 2021-01-29
date published: 2021-01-29
language: English
is part of: https://doi.org/10.5878/z0ee-kc16
keywords: Bioinformatics (Computational Biology)
  type: DefinedTerm
  term code: 10203
keywords: Genetics and Genomics
  type: DefinedTerm
  term code: 10609
keywords: Evolutionary Biology
  type: DefinedTerm
  term code: 10615
keywords: Forest Science
  type: DefinedTerm
  description: Including: Silviculture, Forest Genetics, Forest Mycology, Forest Pathology, Forest Technology, Forest History, Forest Ecology, Forest Economics
  term code: 40104
keywords: Biota
keywords: Geoscientific Information
keywords: Environment
keywords: Location
keywords: genetic population structure
keywords: population structure
keywords: population genetics
keywords: GBS
keywords: Pinus sylvestris
keywords: Scots pine
license: https://creativecommons.org/licenses/by-sa/4.0/
publisher: Umeå University
size: QuantitativeValue
  unit text: variables
  value: 4
spatial coverage: Northern Europe
temporal coverage: 1985/2017
distribution: data/pheno_pop.txt
  type: DataDownload
  additional type: data
  conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
  conditions of access: info:eu-repo/semantics/openAccess
  content size: 21032
  encoding format: text/plain
distribution: documentation/Data description and analysis_Archive.pdf
  type: DataDownload
  additional type: documentation
  conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
  conditions of access: info:eu-repo/semantics/openAccess
  content size: 346432
  encoding format: application/pdf
distribution: documentation/Data description and analysis_Bookmarks.pdf
  type: DataDownload
  additional type: documentation
  conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
  conditions of access: info:eu-repo/semantics/openAccess
  content size: 193736
  encoding format: application/pdf
version: 1

PropertyValue
property ID: DOI
value: 10.5878/0msc-3v36

PropertyValue
property ID: DOI
value: 10.1016/j.xplc.2020.100139

David Hall
type: Person
affiliation: Umeå University
family name: Hall
given name: David

Umeå University
type: Organization
department: Ecology and Environmental Science

English
type: Language
alternate name: eng

Biota
type: DefinedTerm
description: Flora and/or fauna in natural environment.
term code: biota

Geoscientific Information
type: DefinedTerm
description: Information pertaining to earth sciences.
term code: geoscientific-information

Environment
type: DefinedTerm
description: Environmental resources, protection and conservation.
term code: environment

Location
type: DefinedTerm
description: Positional information and services.
term code: location

genetic population structure
type: DefinedTerm
term code: 21675

population structure
type: DefinedTerm
description: [GEMET] The organization of, and inter-relationships among, inhabitants of a given region, country or city.
term code: 21415

population genetics
type: DefinedTerm
description: [Henderson's] the study of how genetic principles apply to groups of inter­breeding individuals (a population) as a whole.
term code: 21639