Case, travel, socioeconomic and meteorological data for analysing socioeconomic and environmental patterns behind H1N1 spreading in Sweden
type: Dataset
description: Collection of socio-economic and meteorological indicators as well as travel patterns and cases of H1N1 during the swine flu pandemic in Sweden in 2009. Comprise the supplementary information for the paper titled "Socioeconomic and environmental patterns behind H1N1 spreading in Sweden" by András Bóta, Martin Holmberg, Lauren Gardner and Martin Rosvall, Sci Rep 11, 22512 (2021). https://doi.org/10.1038/s41598-021-01857-4 Identifying the critical socio-economic, travel and climate factors related to influenza spreading is critical to the prediction and mitigation of epidemics. In the paper we study the 2009 A(H1N1) outbreak in the municipalities of Sweden, following it for six years between 2009 and 2015. Our goal is to discover the relationship between the above indicators and the timing of the epidemic onset of the disease. We also identify the municipalities playing a key role in the outbreak as well as the most critical travel routes of the country. Publication available at: https://doi.org/10.1038/s41598-021-01857-4 Municipality codes for the municipalities of Sweden can be found here: https://www.scb.se/en/finding-statistics/regional-statistics/regional-divisions/counties-and-municipalities/counties-and-municipalities-in-numerical-order/ Data available according to Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0) license Model inputs 1. giim_kommun_graph.csv Set of frequent travel routes between the municipalities of Sweden. The graph was constructed from "Trafikanalys, 2016. Resvanor. (accessed 26.8.19). Available from: http://www.trafa.se/RVU-Sverige/." using the methodology described in the paper. Date of construction: 2018-12-01 Format: csv Structure: edge list in (kommun1;kommun2) format with rows indicating a directed link between two municipalities. Municipalities are denoted according to their official municipal code 2. giim_casecounts.xlsx Number of new H1N1 cases in the municipalities of Sweden between 2009 and 2015. Our dat…
citation: Bóta A, Holmberg M, Gardner L, Rosvall M. Socio-economic and environmental patterns behind H1N1 spreading in Sweden. Sci Rep 11, 22512 (2021). https://doi.org/10.1038/s41598-021-01857-4
citation: CreativeWork
  name: Klein Tank A, Wijngaard J, Können G, Böhm R, Demarée G, Gocheva A, et al. Daily dataset of 20th-century surface air temperature and precipitation series for the European Climate Assessment. International Journal of Climatology: A Journal of the Royal Meteorological Society. 2002;22(12):1441–1453.
conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
conditions of access: info:eu-repo/semantics/openAccess
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: András Bota
creator: Martin Holmberg
  type: Person
  affiliation: Umeå University
  family name: Holmberg
  given name: Martin
creator: Lauren Gardner
creator: Martin Rosvall
date modified: 2025-06-27
date published: 2021-11-03
funding: Grant
  description: Martin Rosvall was supported by the Swedish Research Council, grant 2016-00796
  funder: Swedish Research Council
funding: Grant
  description: András Bóta was supported by the Olle Engkvist Byggmästare Foundation
  funder: Olle Engkvist Byggmästare Foundation
language: English
is part of: https://doi.org/10.5878/5y1d-dj17
keywords: Specific diseases, disorders and medical conditions
keywords: Information technology
keywords: Computer Sciences
  type: DefinedTerm
  term code: 10201
keywords: Health
keywords: Public health
keywords: Public Health, Global Health and Social Medicine
  type: DefinedTerm
  term code: 30311
keywords: Epidemiology
  type: DefinedTerm
  term code: 30116
keywords: Socioeconomic Factors
keywords: Temperature
keywords: Influenza A Virus, H1N1 Subtype
keywords: Pandemics
keywords: network analysis
license: https://creativecommons.org/licenses/by-nc/4.0/
publisher: Umeå University
spatial coverage: Sweden
temporal coverage: 2009/2015
distribution: data/giim_casecounts.xlsx
  type: DataDownload
  additional type: data
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distribution: data/giim_export_risk.csv
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distribution: data/giim_import_risk.csv
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distribution: data/giim_kommun_graph.csv
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distribution: data/giim_kommun_indicators.csv
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distribution: documentation/description.txt
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version: 1

PropertyValue
property ID: DOI
value: 10.5878/0hkf-tn97

PropertyValue
property ID: DOI
value: 10.1038/s41598-021-01857-4

PropertyValue
property ID: DOI
value: 10.1002/joc.773

András Bota
type: Person
affiliation: Luleå University of Technology
family name: Bota
given name: András

Luleå University of Technology
type: Organization
department: Department of Computer Science, Electrical and Space Engineering

Umeå University
type: Organization
department: Department of Physics, Integrated Science Lab

Lauren Gardner
type: Person
affiliation: Johns Hopkins University
  type: Organization
  department: Department of Civil and Systems Engineering
family name: Gardner
given name: Lauren

Martin Rosvall
type: Person
affiliation: Umeå University
family name: Rosvall
given name: Martin

English
type: Language
alternate name: eng

Specific diseases, disorders and medical conditions
type: DefinedTerm
description: Data on specific, diagnosed diseases, disorders or syndromes (often classified in ICD-10 or its earlier versions). For example, medical research on infectious diseases or the causes of diabetes, or data on the physical and mental recovery of people who have had heart surgery.
term code: Health.SpecificDiseasesDisordersAndMedicalConditions

Information technology
type: DefinedTerm
description: Information and communication technologies that are used in the home, workplace and other community setting. Use note: The use and impact of these technologies are covered by 'Information society'.
term code: ScienceAndTechnology.InformationTechnology

Health
type: DefinedTerm
description: Health, health services, human ecology, and safety.
term code: health

Public health
type: DefinedTerm
description: Prevention and control of disease and disability, and the promotion of physical and mental health of the population on the international, national, state, or municipal level. For instance, health promotion, disease prevention, impact of public health programmes, managing local, national or global health issues, epidemiology of a disease, condition, or pathogen, or disease outbreak.
term code: Health.PublicHealth

INFLUENZA
type: DefinedTerm

PUBLIC HEALTH
type: DefinedTerm
description: CONCERNED WITH THE PREVENTION AND CONTROL OF DISEASE AND DISABILITY, AND THE PROMOTION OF THE PHYSICAL AND MENTAL HEALTH OF THE POPULATION

Socioeconomic Factors
type: DefinedTerm
description: Social and economic factors that characterize the individual or group within the social structure.
term code: D012959

EPIDEMIOLOGY
type: DefinedTerm

Temperature
type: DefinedTerm
description: The property of objects that determines the direction of heat flow when they are placed in direct thermal contact. The temperature is the energy of microscopic motions (vibrational and translational) of the particles of atoms.
term code: D013696

Influenza A Virus, H1N1 Subtype
type: DefinedTerm
description: A subtype of INFLUENZA A VIRUS with the surface proteins hemagglutinin 1 and neuraminidase 1. The H1N1 subtype was responsible for the Spanish flu pandemic of 1918 and 2009 H1N1 pandemic.
term code: D053118

Pandemics
type: DefinedTerm
description: Epidemics of infectious disease that have spread to many countries, often more than one continent, and usually affecting a large number of people.
term code: D058873

network analysis
type: DefinedTerm
term code: 20239

Sweden
type: Place