<codeBook xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xsi:schemaLocation="ddi:codebook:2_5 http://www.ddialliance.org/Specification/DDI-Codebook/2.5/XMLSchema/codebook.xsd" xmlns="ddi:codebook:2_5">
  <docDscr>
    <citation>
      <titlStmt>
        <titl xml:lang="sv">Clupeids and stickleback biomass, fishery landings, and hydrographic variables from the Baltic Sea</titl>
        <parTitl xml:lang="en">Clupeids and stickleback biomass, fishery landings, and hydrographic variables from the Baltic Sea</parTitl>
        <IDNo agency="SND">2024-158-1</IDNo>
        <IDNo agency="slu.se">SLU.aqua.2024.5.4-181</IDNo>
        <IDNo agency="DOI">https://doi.org/10.5878/ka8r-8e34</IDNo>
      </titlStmt>
      <prodStmt>
        <producer xml:lang="en" abbr="SND">Swedish National Data Service</producer>
        <producer xml:lang="sv" abbr="SND">Svensk nationell datatjänst</producer>
      </prodStmt>
      <holdings URI="https://doi.org/10.5878/ka8r-8e34">Landing page</holdings>
    </citation>
  </docDscr>
  <stdyDscr>
    <citation>
      <titlStmt>
        <titl xml:lang="sv">Clupeids and stickleback biomass, fishery landings, and hydrographic variables from the Baltic Sea</titl>
        <parTitl xml:lang="en">Clupeids and stickleback biomass, fishery landings, and hydrographic variables from the Baltic Sea</parTitl>
        <IDNo agency="SND">2024-158-1</IDNo>
        <IDNo agency="slu.se">SLU.aqua.2024.5.4-181</IDNo>
        <IDNo agency="DOI">https://doi.org/10.5878/ka8r-8e34</IDNo>
        <IDNo agency="DOI">10.1093/icesjms/fsae168</IDNo>
      </titlStmt>
      <rspStmt>
        <AuthEnty xml:lang="en" affiliation="Department of Aquatic Resources (SLU Aqua), Swedish University of Agricultural Sciences">Donadi, Serena</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Institutionen för akvatiska resurser, Sveriges lantbruksuniversitet">Donadi, Serena</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Swedish University of Agricultural Sciences">Kaljuste, Olavi</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Kaljuste, Olavi</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Swedish University of Agricultural Sciences">Larson, Niklas</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Larson, Niklas</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Swedish University of Agricultural Sciences">Fredriksson, Ronny</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Fredriksson, Ronny</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Swedish University of Agricultural Sciences">Erlandsson, Mårten</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Erlandsson, Mårten</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Swedish University of Agricultural Sciences">Casini, Michele</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Casini, Michele</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Department of Aquatic Resources (SLU Aqua), Swedish University of Agricultural Sciences">Olin, Agnes</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Sveriges lantbruksuniversitet">Olin, Agnes</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Stockholm University">Eklöf, Johan</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Stockholms universitet">Eklöf, Johan</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Linnaeus University">Nilsson, Jonas</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Linnaeus University">Nilsson, Jonas</AuthEnty>
        <AuthEnty xml:lang="en" affiliation="Department of Aquatic Resources (SLU Aqua), Swedish University of Agricultural Sciences">Bergström, Ulf</AuthEnty>
        <AuthEnty xml:lang="sv" affiliation="Institutionen för akvatiska resurser, Sveriges lantbruksuniversitet">Bergström, Ulf</AuthEnty>
      </rspStmt>
      <prodStmt>
        <grantNo xml:lang="en" agency="Swedish Research Council">2019-00310</grantNo>
        <grantNo xml:lang="sv" agency="Vetenskapsrådet">2019-00310</grantNo>
        <grantNo xml:lang="en" agency="Swedish Research Council">2023-00297</grantNo>
        <grantNo xml:lang="sv" agency="Vetenskapsrådet">2023-00297</grantNo>
        <grantNo xml:lang="en" agency="Swedish Agency for Marine and Water Management">1049-20</grantNo>
        <grantNo xml:lang="sv" agency="Havs- och Vattenmyndigheten">1049-20</grantNo>
      </prodStmt>
      <distStmt>
        <distrbtr xml:lang="en" abbr="SND" URI="https://snd.se">Swedish National Data Service</distrbtr>
        <distrbtr xml:lang="sv" abbr="SND" URI="https://snd.se">Svensk nationell datatjänst</distrbtr>
        <distDate xml:lang="en" date="2024-11-18" />
      </distStmt>
      <verStmt>
        <version elementVersion="1" elementVersionDate="2024-11-18" />
      </verStmt>
      <holdings URI="https://doi.org/10.5878/ka8r-8e34">Landing page</holdings>
    </citation>
    <stdyInfo>
      <subject>
        <keyword xml:lang="en" vocab="GCMD" vocabURI="https://gcmd.nasa.gov/kms/concept/8dd7c9f0-51d0-4037-b1d0-a2517c1770ad">NUTRIENTS</keyword>
        <keyword xml:lang="en" vocab="GEMET" vocabURI="http://www.eionet.europa.eu/gemet/concept/3237">fishery</keyword>
        <keyword xml:lang="sv" vocab="GEMET" vocabURI="http://www.eionet.europa.eu/gemet/concept/3237">fiskeri</keyword>
        <keyword xml:lang="en" vocab="EnvThes" vocabURI="http://vocabs.lter-europe.net/EnvThes/22313">water temperature</keyword>
        <keyword xml:lang="en" vocab="EnvThes" vocabURI="http://vocabs.lter-europe.net/EnvThes/10308">water salinity</keyword>
        <keyword xml:lang="en" vocab="INSPIRE Spatial Data Themes" vocabURI="http://inspire.ec.europa.eu/theme/hy">Hydrography</keyword>
        <keyword xml:lang="sv" vocab="INSPIRE Spatial Data Themes" vocabURI="http://inspire.ec.europa.eu/theme/hy">Hydrografi</keyword>
        <keyword xml:lang="en" vocab="INSPIRE Spatial Data Themes" vocabURI="http://inspire.ec.europa.eu/theme/sd">Species distribution</keyword>
        <keyword xml:lang="sv" vocab="INSPIRE Spatial Data Themes" vocabURI="http://inspire.ec.europa.eu/theme/sd">Arters utbredning</keyword>
        <keyword xml:lang="en" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p10809">sprat</keyword>
        <keyword xml:lang="sv" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p10809">vassbuk</keyword>
        <keyword xml:lang="en" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p21585">Atlantic herring</keyword>
        <keyword xml:lang="sv" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p21585">sill</keyword>
        <keyword xml:lang="en" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p21713">threespine stickleback</keyword>
        <keyword xml:lang="sv" vocab="YSO" vocabURI="http://www.yso.fi/onto/yso/p21713">storspigg</keyword>
        <keyword xml:lang="en" vocab="Catalogue of Life" vocabURI="https://www.catalogueoflife.org/data/taxon/3FCKT">gasterosteus aculeatus linnaeus, 1758</keyword>
        <keyword xml:lang="en" vocab="Catalogue of Life" vocabURI="https://www.catalogueoflife.org/data/taxon/4ZDQT">sprattus sprattus (linnaeus, 1758)</keyword>
        <keyword xml:lang="en" vocab="Catalogue of Life" vocabURI="https://www.catalogueoflife.org/data/taxon/WCQZ">clupea harengus linnaeus, 1758</keyword>
        <topcClas xml:lang="en" vocab="INSPIRE topic categories" vocabURI="http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/biota">Biota</topcClas>
        <topcClas xml:lang="sv" vocab="INSPIRE topic categories" vocabURI="http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/biota">Biologi och ekologi</topcClas>
        <topcClas xml:lang="en" vocab="INSPIRE topic categories" vocabURI="http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/oceans">Oceans</topcClas>
        <topcClas xml:lang="sv" vocab="INSPIRE topic categories" vocabURI="http://inspire.ec.europa.eu/metadata-codelist/TopicCategory/oceans">Kust och hav</topcClas>
      </subject>
      <abstract xml:lang="en" contentType="abstract">Description of the data and file structure: data on fish biomass, fishery landings and hydrographic variables from the Baltic Sea. The data were used to explore the relationships between clupeids and three-spined stickleback, specifically whether reduced predation from herring and competition from both sprat and herring may have contributed to the recent increase of three-spined stickleback in the Baltic Sea.
The data is structured in six separate datasets. Each record report values of fish biomass or abiotic variables related to a specific ICES statistical rectangle (ca. 55 × 55 km size, corresponding to 0.5 degrees in latitude × 1 degree in longitude) and a specific year. The datasets can be merged using the field "year" and "ICES". The files have the following dimensions: ICES_Hydrographic_data_by_year.csv, 4465 rows × 20 columns; herring_biomass.csv, 2056 rows × 5 columns; landings_herring.csv, 2867 rows × 3 columns; landings_sprat.csv, 2108 rows × 3 columns; sprat_biomass.csv, 2042 rows × 4 columns; stic</abstract>
      <abstract xml:lang="sv" contentType="abstract">Beskrivning av data och filstruktur: data om fiskbiomassa, fiskelandningar och hydrografiska variabler från Östersjön. Datan användes för att undersöka sambanden mellan sillfiskar och storspigg, särskilt om minskad predation från sill och konkurrens från både skarpsill och sill kan ha bidragit till den senaste tidens ökning av storspigg i Östersjön.
See English description for more information.</abstract>
      <sumDscr>
        <collDate xml:lang="en" date="2001" event="start">2001</collDate>
        <collDate xml:lang="en" date="2019" event="end">2019</collDate>
        <dataKind xml:lang="en">Numeric</dataKind>
        <dataKind xml:lang="en">Text</dataKind>
      </sumDscr>
    </stdyInfo>
    <method>
      <dataColl>
        <collMode xml:lang="en">The data on fish biomasses were collected via hydroacustic surveys, coupled with information on species and size distributions from trawl hauls.
Commercial landings of herring and sprat expressed as tons per ICES rectangle were provided by the Scientific, Technical and Economic Committee for Fisheries (STECF, https://stecf.jrc.ec.europa.eu/dd/effort/graphs-quarter) for the years 2003–2015, and by the Joint Research Centre (JRC, https://jeodpp.jrc.ec.europa.eu/ftp/jrc-opendata/FAD/fdi2020/) for the years 2016–2019.
Data on water temperature, salinity and nutrient concentrations for the period 2001–2019 for each ICES rectangle were extracted from Copernicus Marine Service Information. The nutrient concentration data were produced using the biogeochemical model ERGOM one-way online-coupled with the ice-ocean model system NEMO (doi.org/10.48670/moi-00012). The salinity and temperature data were produced by DMI (Danmarks Meteorologiske Institut) using NEMO (doi.org/10.48670/moi-00013).

All analyses were conducted in R Statistical Software version 4.2.0 (R Development Core Team 2020). We used the mgcv package (version 1.8-40) for specifying, fitting, and visualising the GAMs (Wood 2011), and the nlme package (version 3.1-162) for fitting generalized least square models (Pinhero et al. 2016).<concept vocab="DDI Mode of Collection" vocabURI="https://vocabularies.cessda.eu/v2/vocabularies/ModeOfCollection/5.0.0?languageVersion=en-5.0.0">The data on fish biomasses were collected via hydroacustic surveys, coupled with information on species and size distributions from trawl hauls.
Commercial landings of herring and sprat expressed as tons per ICES rectangle were provided by the Scientific, Technical and Economic Committee for Fisheries (STECF, https://stecf.jrc.ec.europa.eu/dd/effort/graphs-quarter) for the years 2003–2015, and by the Joint Research Centre (JRC, https://jeodpp.jrc.ec.europa.eu/ftp/jrc-opendata/FAD/fdi2020/) for the years 2016–2019.
Data on water temperature, salinity and nutrient concentrations for the period 2001–2019 for each ICES rectangle were extracted from Copernicus Marine Service Information. The nutrient concentration data were produced using the biogeochemical model ERGOM one-way online-coupled with the ice-ocean model system NEMO (doi.org/10.48670/moi-00012). The salinity and temperature data were produced by DMI (Danmarks Meteorologiske Institut) using NEMO (doi.org/10.48670/moi-00013).

All analyses were conducted in R Statistical Software version 4.2.0 (R Development Core Team 2020). We used the mgcv package (version 1.8-40) for specifying, fitting, and visualising the GAMs (Wood 2011), and the nlme package (version 3.1-162) for fitting generalized least square models (Pinhero et al. 2016).</concept></collMode>
        <collMode xml:lang="en">Compilation/Synthesis<concept vocab="DDI Mode of Collection" vocabURI="https://vocabularies.cessda.eu/v2/vocabularies/ModeOfCollection/5.0.0?languageVersion=en-5.0.0">Compilation/Synthesis</concept></collMode>
        <collMode xml:lang="sv">Kompilering/Syntes<concept vocab="DDI Mode of Collection" vocabURI="https://vocabularies.cessda.eu/v2/vocabularies/ModeOfCollection/5.0.0?languageVersion=sv-5.0.0">Kompilering/Syntes</concept></collMode>
      </dataColl>
    </method>
    <dataAccs>
      <useStmt>
        <restrctn xml:lang="en">Access to data through SND. Data are freely accessible.</restrctn>
        <restrctn xml:lang="sv">Åtkomst till data via SND. Data är fritt tillgängliga.</restrctn>
        <conditions elementVersion="info:eu-repo-Access-Terms vocabulary">openAccess</conditions>
      </useStmt>
    </dataAccs>
    <othrStdyMat>
      <relPubl>
        <citation>
          <titlStmt>
            <titl xml:lang="sv">Serena Donadi, Agnes Olin, Michele Casini, Johan Eklöf, Mårten Erlandsson, Ronny Fredriksson, Olavi Kaljuste, Niklas Larson, Jonas Nilsson, Ulf Bergström, Reduced predation and competition from herring may have contributed to the increase of three-spined stickleback in the Baltic Sea, ICES Journal of Marine Science, 2024; fsae168, https://doi.org/10.1093/icesjms/fsae168</titl>
            <parTitl xml:lang="en">Serena Donadi, Agnes Olin, Michele Casini, Johan Eklöf, Mårten Erlandsson, Ronny Fredriksson, Olavi Kaljuste, Niklas Larson, Jonas Nilsson, Ulf Bergström, Reduced predation and competition from herring may have contributed to the increase of three-spined stickleback in the Baltic Sea, ICES Journal of Marine Science, 2024; fsae168, https://doi.org/10.1093/icesjms/fsae168</parTitl>
            <IDNo agency="DOI">10.1093/icesjms/fsae168</IDNo>
          </titlStmt>
          <distStmt>
            <distDate date="2024">2024</distDate>
          </distStmt>
        </citation>
      </relPubl>
    </othrStdyMat>
  </stdyDscr>
</codeBook>