SUPPLEMENTARY MATERIAL: VisuNet: an interactive tool for rule network visualization of rule-based learning models
type: Dataset
description: The data consists of a pdf file with visualizations and an excel file with following tables: - Table S1 The overview of applications. - Table S2 SFARI result for 4 genes overlapped the rule-network of case-control study of autism and the SFARI genes databese. - Table S3 GO over-representation results for the rule-network of case-control study of autism. - Table S4 Full list of variables used for the rule-based machine learning schema. The list includesmetabolites and pools of metabolites. - Table S5 List of rules for the R.ROSETTA model including support, accuracy and BH-corrected p-value for each rule. The dataset was originally published in DiVA and moved to SND in 2024.
conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
conditions of access: info:eu-repo/semantics/openAccess
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Karolina Smolinska Garbulowska
creator: Mateusz Garbulowski
  type: Person
  affiliation: Uppsala University
  family name: Garbulowski
  given name: Mateusz
creator: Klev Diamanti
creator: Xavier Davoy
  type: Person
  affiliation: The Grenoble Institute of Technology– Phelma
  family name: Davoy
  given name: Xavier
creator: Stephen Omondi Otieno Anyango
  type: Person
  affiliation: Uppsala University
  family name: Anyango
  given name: Stephen Omondi Otieno
creator: Fredrik Barrenäs
  type: Person
  affiliation: Uppsala University
  family name: Barrenäs
  given name: Fredrik
creator: Susanne Bornelöv
creator: Jan Komorowski
date modified: 2024-06-24
date published: 2021-10-11
language: English
is part of: https://doi.org/10.57804/hw5p-yy28
keywords: Bioinformatics and Computational Biology
  type: DefinedTerm
  description: Including: Modelling, Machine Learning
  term code: 10610
keywords: systems biology
keywords: bioinformatics
publisher: Uppsala University
distribution: data/DATASET01.xlsx
  type: DataDownload
  additional type: data
  conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
  conditions of access: info:eu-repo/semantics/openAccess
  content size: 59972
  encoding format: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
distribution: data/FULLTEXT02.pdf
  type: DataDownload
  additional type: data
  conditions of access: http://publications.europa.eu/resource/authority/access-right/PUBLIC
  conditions of access: info:eu-repo/semantics/openAccess
  content size: 1734710
  encoding format: application/pdf
version: 1

PropertyValue
property ID: DOI
value: 10.57804/x4y3-g283

PropertyValue
property ID: URN
value: urn:nbn:se:uu:diva-455846

Karolina Smolinska Garbulowska
type: Person
affiliation: Uppsala University
family name: Smolinska Garbulowska
given name: Karolina

Uppsala University
type: Organization
department: Department of Cell and Molecular Biology, Computational Biology and Bioinformatics / Science for Life Laboratory, SciLifeLab
department: Department of Cell and Molecular Biology, Computational Biology and Bioinformatics
department: Department of Cell and Molecular Biology, Computational Biology and Bioinformatics, Department of Immunology, Genetics and Pathology / Science for Life Laboratory, SciLifeLab

Klev Diamanti
type: Person
affiliation: Uppsala University
family name: Diamanti
given name: Klev

Susanne Bornelöv
type: Person
affiliation: Uppsala University / University of Cambridge
  type: Organization
  department: Department of Medical Biochemistry and Microbiology, Department of Cell and Molecular Biology / Cancer Research UK Cambridge Institute
family name: Bornelöv
given name: Susanne

Jan Komorowski
type: Person
affiliation: Uppsala University, Swedish Collegium for Advanced Study (SCAS)
  type: Organization
  department: Department of Cell and Molecular Biology, Computational Biology and Bioinformatics
family name: Komorowski
given name: Jan

English
type: Language
alternate name: eng

systems biology
type: DefinedTerm
term code: p18941

bioinformatics
type: DefinedTerm
description: Avser insamling, behandling och analys av biologisk och medicinsk information.
term code: p15748