Mass Spectrometry-derived Protein Intensities
type: Dataset
description: Mass spectrometry analysis (data-independent acquisition) derived intensities are reported here for all breast tumor samples (n = 75). RAW data files for these samples are accessible via ProteomeXchange with the dataset identifiers PXD032266 (S samples) and PXD037428 (V samples). Protein intensities were Log2 transformed and scaled (samples and proteins). This dataset was used for Figure 5 in the following manuscript: "Proteogenomics decodes the evolution of human ipsilateral breast cancer". De Marchi T, Pyl PT, Sjöström M, Reinsbach SE, DiLorenzo S, Nystedt B, Tran L, Pekar G, Wärnberg F, Fredriksson I, Malmström P, Fernö M, Malmström L, Malmström J, Nimèus E. accepted for publication
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Tommaso de Marchi
date modified: 2023-01-25
date published: 2023-01-25
keywords: Medical and Health Sciences
  type: DefinedTerm
  term code: 3
keywords: Genetics and Genomics
  type: DefinedTerm
  term code: 10609
keywords: Genomics and transcriptomics
keywords: Proteomics and metabolomics
license: https://creativecommons.org/licenses/by/4.0/
publisher: Lund University
version: 0

PropertyValue
property ID: DOI
value: 10.17044/SCILIFELAB.21904584

Tommaso de Marchi
type: Person
affiliation: Science for Life Laboratory
family name: de Marchi
given name: Tommaso

Science for Life Laboratory
type: Organization

Lund University
type: Organization