<codeBook xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xsi:schemaLocation="ddi:codebook:2_5 http://www.ddialliance.org/Specification/DDI-Codebook/2.5/XMLSchema/codebook.xsd" xmlns="ddi:codebook:2_5">
  <docDscr>
    <citation>
      <titlStmt>
        <titl xml:lang="sv"></titl>
        <parTitl xml:lang="en">Copy Number Table for Matched Primary and Locally Recurrent Breast Tumors</parTitl>
        <IDNo agency="SND">doi-10-17044-scilifelab-21904599-0</IDNo>
        <IDNo agency="DOI">https://doi.org/10.17044/SCILIFELAB.21904599</IDNo>
      </titlStmt>
      <prodStmt>
        <producer xml:lang="en" abbr="SND">Swedish National Data Service</producer>
        <producer xml:lang="sv" abbr="SND">Svensk nationell datatjänst</producer>
      </prodStmt>
      <holdings URI="https://doi.org/10.17044/SCILIFELAB.21904599">Landing page</holdings>
    </citation>
  </docDscr>
  <stdyDscr>
    <citation>
      <titlStmt>
        <titl xml:lang="sv"></titl>
        <parTitl xml:lang="en">Copy Number Table for Matched Primary and Locally Recurrent Breast Tumors</parTitl>
        <IDNo agency="SND">doi-10-17044-scilifelab-21904599-0</IDNo>
        <IDNo agency="DOI">https://doi.org/10.17044/SCILIFELAB.21904599</IDNo>
      </titlStmt>
      <rspStmt>
        <AuthEnty xml:lang="en" affiliation="Science for Life Laboratory">de Marchi, Tommaso</AuthEnty>
      </rspStmt>
      <prodStmt />
      <distStmt>
        <distrbtr xml:lang="en" abbr="SND" URI="https://snd.se">Swedish National Data Service</distrbtr>
        <distrbtr xml:lang="sv" abbr="SND" URI="https://snd.se">Svensk nationell datatjänst</distrbtr>
        <distDate xml:lang="en" date="2023-01-25" />
      </distStmt>
      <verStmt>
        <version elementVersion="0" elementVersionDate="2023-01-25" />
      </verStmt>
      <holdings URI="https://doi.org/10.17044/SCILIFELAB.21904599">Landing page</holdings>
    </citation>
    <stdyInfo>
      <subject />
      <abstract xml:lang="en" contentType="abstract">File reports table on copy number information for matched primary and locally recurrent breast tumors. "CN.table" reports copy number for each sample. "CN.DELTA.table" reports on paired sample copy number changes (CN delta = CN.recurrence - CN.primary) for each tumor pair.

This dataset was used for Figure 3 in the following manuscript:

"Proteogenomics decodes the evolution of human ipsilateral breast cancer". De Marchi T, Pyl PT, Sjöström M, Reinsbach SE, DiLorenzo S, Nystedt B, Tran L, Pekar G, Wärnberg F, Fredriksson I, Malmström P, Fernö M, Malmström L, Malmström J, Nimèus E. accepted for publication</abstract>
      <sumDscr />
    </stdyInfo>
    <method>
      <dataColl />
    </method>
    <dataAccs>
      <useStmt>
        <restrctn xml:lang="en">Access to data through an external actor. </restrctn>
        <restrctn xml:lang="sv">Åtkomst till data via extern aktör. </restrctn>
      </useStmt>
    </dataAccs>
    <othrStdyMat />
  </stdyDscr>
</codeBook>