NBIS-AF2-standard and NBIS-AF2-multimer: CASP15 baseline predictions, Multiple Sequence Alignments and ancillary outputs
type: Dataset
distribution: Landing page for the dataset
description: This dataset contains all AlphaFold (v2.2) monomeric and multimeric predictions used as baseline during CASP15, as well as the input Multiple Sequence Alignments (MSAs) and binary outputs such as distograms etc. Computations for the CASP15 baseline predictions and MSAs were performed at NSC BerzeLiUs and Tetralith provided by the Swedish National Infrastructure for Computing (SNIC), partially funded by the Swedish Research Council through grant agreement no. 2018-05973. The Snakemake workflow used to generate the models is open source and available at: https://github.com/clami66/AF_server/ Documentation for better reproducibility: http://bioinfo.ifm.liu.se/casp15/reproduce/
modified: 2023-05-31T00:00:00Z
issued: 2023-05-08T00:00:00Z
publisher: Linköping University
theme: HEAL
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Claudio Mirabello
    type: Agent
    account: 0000-0001-7868-034X
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Arne Elofsson
    type: Agent
    account: https://orcid.org/0000-0002-7115-9751
    type: PrivateIndividual(s)
keyword: Bioinformatics and computational biology not elsewhere classified
keyword: Structural biology (incl. macromolecular modelling)

Landing page for the dataset
type: Distribution
title: Landningssida för datasetet @sv
access URL: NBIS-AF2-standard and NBIS-AF2-multimer: CASP15 baseline predictions, Multiple Sequence Alignments and ancillary outputs
availability: stable

Linköping University
type: Agent
name: Linköpings universitet @sv
type: Academia-ScientificOrganisation
source: 05ynxx418