NBIS-AF2-standard and NBIS-AF2-multimer: CASP15 baseline predictions, Multiple Sequence Alignments and ancillary outputs
type: Dataset
description: This dataset contains all AlphaFold (v2.2) monomeric and multimeric predictions used as baseline during CASP15, as well as the input Multiple Sequence Alignments (MSAs) and binary outputs such as distograms etc. Computations for the CASP15 baseline predictions and MSAs were performed at NSC BerzeLiUs and Tetralith provided by the Swedish National Infrastructure for Computing (SNIC), partially funded by the Swedish Research Council through grant agreement no. 2018-05973. The Snakemake workflow used to generate the models is open source and available at: https://github.com/clami66/AF_server/ Documentation for better reproducibility: http://bioinfo.ifm.liu.se/casp15/reproduce/
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Claudio Mirabello
creator: Arne Elofsson
date modified: 2023-05-31
date published: 2023-05-08
funding: SNIC 2.0: Swedish National Infrastructure for Computing
  type: Grant
  funder: Swedish Research Council
keywords: Medical and Health Sciences
  type: DefinedTerm
  term code: 3
keywords: Structural Biology
  type: DefinedTerm
  term code: 10601
keywords: Bioinformatics (Computational Biology)
  type: DefinedTerm
  term code: 10203
keywords: Bioinformatics and computational biology not elsewhere classified
keywords: Structural biology (incl. macromolecular modelling)
publisher: Linköping University
version: 0

PropertyValue
property ID: DOI
value: 10.17044/SCILIFELAB.22769996

Claudio Mirabello
type: Person
affiliation: Science for Life Laboratory
family name: Mirabello
given name: Claudio

Science for Life Laboratory
type: Organization

Arne Elofsson
type: Person
affiliation: Science for Life Laboratory
family name: Elofsson
given name: Arne

Swedish Research Council
type: Organization

Linköping University
type: Organization