Single-cell ATAC sequencing data from: Single-cell genomics details the maturation block in BCP-ALL and identifies therapeutic vulnerabilities in DUX4-r cases
type: Dataset
description: This dataset contains single-cell ATAC sequencing data from nineteen cases of childhood BCP-ALL and four samples of mononuclear cells from normal bone marrow from healthy donors. The dataset is available as raw sequencing reads (fastq; restricted access) or as an annotated ATAC dataset (h5ad). The libraries were prepared according to the manufacturer’s instructions (10x Genomics CG000169: Nuclei Isolation for Single Cell ATAC Sequencing; 10x Genomics CG000209: Chromium Single Cell ATAC Reagent Kits v1.1).) and sequenced on a Novaseq 6000.
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Hanna Thorsson
  type: Person
  affiliation: Science for Life Laboratory
  family name: Thorsson
  given name: Hanna
creator: Rasmus Henningsson
  type: Person
  family name: Henningsson
  given name: Rasmus
creator: Noelia Puente-Moncada
  type: Person
  family name: Puente-Moncada
  given name: Noelia
creator: Ludvig Sjöström
  type: Person
  family name: Sjöström
  given name: Ludvig
creator: Helena Ågerstam
  type: Person
  family name: Ågerstam
  given name: Helena
creator: Pablo Peña-Martínez
  type: Person
  family name: Peña-Martínez
  given name: Pablo
creator: Carl Sandén
  type: Person
  family name: Sandén
  given name: Carl
creator: Marianne Rissler
  type: Person
  family name: Rissler
  given name: Marianne
creator: Anders Castor
  type: Person
  family name: Castor
  given name: Anders
creator: Hanne Vibeke Marquart
  type: Person
  family name: Marquart
  given name: Hanne Vibeke
creator: Signe Modvig
  type: Person
  family name: Modvig
  given name: Signe
creator: Kajsa Paulsson
  type: Person
  family name: Paulsson
  given name: Kajsa
creator: Cornelis Jan Pronk
  type: Person
  family name: Pronk
  given name: Cornelis Jan
creator: Kjeld Schmiegelow
  type: Person
  family name: Schmiegelow
  given name: Kjeld
creator: Axel Hyrenius Wittsten
  type: Person
  family name: Wittsten
  given name: Axel Hyrenius
creator: Christina Orsmark-Pietras
  type: Person
  family name: Orsmark-Pietras
  given name: Christina
creator: Henrik Lilljebjörn
  type: Person
  family name: Lilljebjörn
  given name: Henrik
creator: Thoas Fioretos
  type: Person
  family name: Fioretos
  given name: Thoas
date modified: 2025-01-29
date published: 2025-01-29
keywords: Medical and Health Sciences
  type: DefinedTerm
  term code: 3
keywords: Cancer and Oncology
  type: DefinedTerm
  term code: 30203
keywords: Cancer genetics
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
publisher: Lund University
version: 0

PropertyValue
property ID: DOI
value: 10.17044/SCILIFELAB.23592303

Science for Life Laboratory
type: Organization

Lund University
type: Organization