Gene annotation of Linum trigynum
type: Dataset
distribution: Landing page for the dataset
description: The file contains the genes annotation of Linum trigynum genome. The genome has been deposited to [ENA](https://www.ebi.ac.uk/ena/browser/home) with the accession id: GCA_964030455 (project PRJEB67577). The genes annotation has been done with [TSEBRA](https://github.com/Gaius-Augustus/TSEBRA). The genes contained in the S-locus region has been manually annotated using [StringTie](https://ccb.jhu.edu/software/stringtie/) and [TransDecoder](https://github.com/TransDecoder/). The conversion from gtf to gff3 has been done with [AGAT](https://agat.readthedocs.io/en/latest/index.html). It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087
modified: 2024-08-29T00:00:00Z
issued: 2024-08-29T00:00:00Z
publisher: Stockholm University
theme: HEAL
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Marco Fracassetti
    type: Agent
    account: https://orcid.org/0000-0002-2962-2669
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Tanja Slotte
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Juanita Gutierrez-Valencia
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Panagiotis-Ioannis Zervakis
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Zoé Postel
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Ignas Bunikis
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Lucile Soler
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Aleksandra Losvik
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Aurelie Desamore
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: P. William Hughes
    type: Agent
    account: https://orcid.org/0000-0003-4142-2579
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Sara Mehrabi
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Benjamin Laenen
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Mohamed Abdelaziz
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Olga Vinnere Pettersson
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Juan Arroyo
    type: Agent
    type: PrivateIndividual(s)
keyword: Evolutionary ecology

Landing page for the dataset
type: Distribution
title: Landningssida för datasetet @sv
access URL: Gene annotation of Linum trigynum
availability: stable

Stockholm University
type: Agent
name: Stockholms universitet @sv
type: Academia-ScientificOrganisation
source: 05f0yaq80