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      <r:Content xml:lang="en">The file contains the annotation for the repetitive regions in 

Linum tenue

.

The detection of repeats has been done with RepeatMasker/RepeatModeler (https://www.repeatmasker.org/) using a custom repeat library.

The genome has been deposited to ENA with the accession id: GCA_946122785 (Project PRJEB52918). See link below.

It is part of this article Gutiérrez-Valencia, J., Fracassetti, M., Berdan, E. L., Bunikis, I., Soler, L., Dainat, J., ... &amp; Slotte, T. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular level. 

Current Biology

, 

32

(20), 4360-4371. 10.1016/j.cub.2022.08.042

The file is in BED format converted with [BEDOPS](https://bedops.readthedocs.io/en/latest/content/reference/file-management/conversion/rmsk2bed.html). The fourth (Repeat class) and eleventh (Repeat name) columns have been reversed to highlight the Repeat name in the visualization.   


Query sequence	1	chromosome

Query start	2	start

Query end	3	stop

Repeat class	4	id

Smith-Waterman score	5	score

Strand	6	strand

Percentage, substitutions	7	 

Percentage, deleted bases	8	 

Percentage, inserted bases	9	 

Bases in query, past match	10	 

Repeat name	11	 

Bases in complement of the repeat consensus sequence	12	 

Match start	13	 

Match end	14	 

Unique ID	15	 

Higher-scoring match (optional)	16</r:Content>
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