Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"
type: Dataset
distribution: Landing page for the dataset
description: "Sprat_DeDup_v2_HiC.fasta.gz" contians the draft genome used in the study, in FASTA format. It is the version upon the SNPs (single nucleotide polymorphisms) described have been called. "Sprat_pool_AD_DeDup_v2_PASS.txt.gz" contains tab-separated allele counts, as output using the "--counts" option in vcftools, from pool re-sequencting of the samples used in the study. Please see the corresponding supplementary information for sample codes etc. These counts underly the frequencies used throughout the study.
modified: 2024-05-23T00:00:00Z
issued: 2024-05-23T00:00:00Z
publisher: Uppsala University
theme: HEAL
qualified attribution: Attribution
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  agent: Mats Pettersson
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    account: https://orcid.org/0000-0002-7372-9076
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  agent: François Besnier
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    account: https://orcid.org/0000-0003-1543-8112
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  agent: Ignas Bunikis
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  agent: Roger Lille-Langøy
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  had role: principalInvestigator
  agent: Iole Leonori
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  agent: Andreas Wallberg
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    account: https://orcid.org/0000-0002-9081-9663
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  agent: Leif Andersson
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    account: https://orcid.org/0000-0002-4085-6968
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keyword: Biological adaptation
keyword: Genomics

Landing page for the dataset
type: Distribution
title: Landningssida för datasetet @sv
access URL: Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"
availability: stable

Uppsala University
type: Agent
name: Uppsala universitet @sv
type: Academia-ScientificOrganisation
source: https://ror.org/048a87296