Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring"
"Sprat_DeDup_v2_HiC.fasta.gz" contians the draft genome used in the study, in FASTA format. It is the version upon the SNPs (single nucleotide polymorphisms) described have been called. "Sprat_pool_AD_DeDup_v2_PASS.txt.gz" contains tab-separated allele counts, as output using the "--counts" option in vcftools, from pool re-sequencting of the samples used in the study. Please see the corresponding supplementary information for sample codes etc. These counts underly the frequencies used throughout the study.
Biological adaptation
Genomics
Landing page for the dataset
Landningssida för datasetet
Uppsala University
Uppsala universitet