Data for metabolomics and transcriptomics resources for the identification of candidate genes in the biosynthesis of specialized metabolites in Populus tremula (L).
type: Dataset
distribution: Landing page for the dataset
description: Despite their importance, the pathways and enzymes associated with the biosynthesis of many specialized metabolites are yet to be characterized. The integration of multi-omics data represents a powerful approach to link genes encoding enzymes and their regulatory factors to metabolite biosynthesis. However, suitable multi-omics data resources for this approach are scarce. Here we present a data resource comprising Liquid Chromatography Mass Spectrometry (LC-MS) and mRNA-Sequencing data from European aspen (Populus tremula L.) including tissues sampled from different organs, and genotypes that produce contrasting sets of salicinoid phenolic glucosides (SPGs), that are specialized metabolites characteristic for Salicaceae.
modified: 2025-03-25T00:00:00Z
issued: 2025-03-25T00:00:00Z
publisher: Umeå University
theme: HEAL
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Sara M. Rydman
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Kathryn Robinson
    type: Agent
    account: 0000-0002-5249-604X
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Jenna Lihavainen
    type: Agent
    account: https://orcid.org/0000-0001-7979-8876
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Benedicte R. Albrectsen
    type: Agent
    account: https://orcid.org/0000-0002-9337-4540
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Stefan Jansson
    type: Agent
    type: PrivateIndividual(s)
qualified attribution: Attribution
  had role: principalInvestigator
  agent: Nathaniel Street
    type: Agent
    account: 0000-0001-6031-005X
    type: PrivateIndividual(s)
keyword: Plant biochemistry
keyword: Biological network analysis
keyword: Genomics and transcriptomics
keyword: Gene expression (incl. microarray and other genome-wide approaches)

Landing page for the dataset
type: Distribution
title: Landningssida för datasetet @sv
access URL: Data for metabolomics and transcriptomics resources for the identification of candidate genes in the biosynthesis of specialized metabolites in Populus tremula (L).
availability: stable

Umeå University
type: Agent
name: Umeå universitet @sv
type: Academia-ScientificOrganisation
source: 05kb8h459