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              <r:String>Daniel Lundin</r:String>
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        <r:String xml:lang="en">NrdJ phylogeny</r:String>
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          <r:String xml:lang="sv">Stockholms universitet</r:String>
          <r:String xml:lang="en">Stockholm University</r:String>
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          <r:String xml:lang="sv">Stockholms universitet</r:String>
          <r:String xml:lang="en">Stockholm University</r:String>
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        <r:SimpleDate>2017-07-06</r:SimpleDate>
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      <r:Content xml:lang="en">Maximum likelihood phylogeny (RAxML; Stamatakis 2014) of representatives of 75% identity USEARCH clusters (Edgar 2010) of the full diversity of class II ribonucleotide reductases (NrdJ). Reliable positions in a Probcons (Do et al. 2005) alignment were selected with the BMGE algorithm using the BLOSUM30 matrix (Criscuolo &amp; Gribaldo 2010) PROTGAMMAAUTO model.

The alignment is available in Seaview format (Gouy et al. 2010; http://doua.prabi.fr/software/seaview) with defined character sets for the different BMGE selections. The phylogenetic tree is available in nexml format that can be opened in Dendroscope (Huson et al. 2007; http://dendroscope.org/) and other tree viewers.</r:Content>
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