Whole exome sequencing data from 120 AML samples fega-sweden-egad50000001575-html-0 Swedish National Data Service Svensk nationell datatjänst Whole exome sequencing data from 120 AML samples fega-sweden-egad50000001575-html-0 Lund University Swedish National Data Service Svensk nationell datatjänst This dataset contains bam-files from whole exome sequencing of 120 paired tumor-normal pairs from AML. Tumor DNA was extracted from either bone marow or peripheral blood from primary AML samples. Normal DNA was extracted from cultured skin fibroblast samples. The libraries were prepared using the Nextera rapid capture exome kit and sequenced on an Illumina NextSeq 500 using 2x151bp paired end chemistry. The fastq files generated by sequencing were aligned to the human hg19 reference genome (ucsc.hg19.fasta from the GATK resource bundle) using bwa (0.7.9a-r786 or 0.7.15-r1140) and duplicate reads were identified using samblaster (0.1.24). This dataset is 1 of 4 included in the study titled The cellular state space of AML unveils novel NPM1 subtypes with distinct clinical outcomes and immune evasion properties, http://identifiers.org/ega.study:EGAS50000001084. Access to data through an external actor. Åtkomst till data via extern aktör.