10X single cell RNA- and feature barcode sequencing of 38 AML samples
type: Dataset
description: This dataset contains fastq-files from single cell 3' RNA- and feature barcode sequencing of AML samples using 10X technology (Chromium Single Cell 3ʹ Reagent Kit v3). In total, the dataset contains data from 38 AML samples from either bone marrow or peripheral blood, representing the following genetic subtypes: NPM1-mutated, myelodysplasia related, TP53-mutated, CBFB::MYH11, RUNX1::RUNX1T1, AML without class-defining mutations, and AML meeting criteria of two subtypes. The data consists of sequenced gene expression libraries from 38 samples and feature barcoding libraries covering a panel of 10-14 surface proteins for 34 samples. This dataset is one of 4 datasets included in the study "The cellular state space of AML unveils novel NPM1 subtypes with distinct clinical outcomes and immune evasion properties" (http://identifiers.org/ega.study:EGAS50000001084).
conditions of access: https://publications.europa.eu/resource/authority/access-right/NON_PUBLIC
conditions of access: info:eu-repo/semantics/restrictedAccess
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Lund University
date modified: 2025-06-30
date published: 2025-06-30
language: English
is part of: http://identifiers.org/ega.study:EGAS50000001084
keywords: Genetics and Genomics
  type: DefinedTerm
  term code: 10609
keywords: cancer
keywords: health
keywords: human
publisher: Lund University
version: 0

PropertyValue
property ID: PURL
value: http://identifiers.org/ega.dataset:EGAD50000001577

English
type: Language
alternate name: eng

Lund University
type: Organization