CO1 Amplicon Sequence Variants of bulk arthropod samples (mild lysis) collected with Malaise traps from the Insect Biome Atlas project in Sweden
type: Dataset
description: Amplicon Sequence Variants of 418bp of CO1 from mild lysed arthropod community samples collected with Malaise traps from the Insect Biome Atlas project (https://www.insectbiomeatlas.org/) in Sweden, as described in the IBA data paper (https://doi.org/10.1038/s41597-025-05151-0) . This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.se/) , and has been updated from 'Metadata only' to 'Occurrence' type. Occurrence data were compiled from the following IBA Figshare items: Processed ASV data from the Insect Biome Atlas Project v3: (https://figshare.scilifelab.se/articles/dataset/Processed_ASV_data_from_the_Insect_Biome_Atlas_Project/27202368/3) - cleaned_noise_filtered_cluster_taxonomy_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067528) - spikeins_tax_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067531) Amplicon sequence variants from the Insect Biome Atlas project v6: (https://figshare.scilifelab.se/articles/dataset/Amplicon_sequence_variants_from_the_Insect_Biome_Atlas_project/25480681/6) - co1_asv_counts_se.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/46381132) - co1_asv_seqs_se.fasta.gz (https://figshare.scilifelab.se/ndownloader/files/46381138) The following samples were excluded from this resource due to sequencing failure: P23412_1633, P23412_1638, P23412_1641, P23412_1647; or lack of non-zero counts for annotated ASVs: P20863_1580, P23412_1318, P25061_1224, P25061_1440, P25061_1463, P25061_1711, P25061_1734, P25259_1134, P25259_1250.
contributor: Fredrik Ronquist
  type: Person
  affiliation: Swedish Museum of Natural History
creative work status: completed
  type: DefinedTerm
  in defined term set: http://publications.europa.eu/resource/authority/dataset-status
  term code: COMPLETED
creator: Andreia Miraldo
  type: Person
  affiliation: Swedish Museum of Natural History
creator: John Sundh
  type: Person
  affiliation: Stockholm University
creator: Elzbieta Iwaszkiewicz-Eggebrecht
creator: Emma Granqvist
creator: Lokeshwaran Manoharan
creator: Piotr Łukasik
creator: Ayco J. M. Tack
creator: Anders F. Andersson
creator: Tomas Roslin
creator: Fredrik Ronquist
  type: Person
  affiliation: Swedish Museum of Natural History
date modified: 2026-02-09
date published: 2024-11-07
language: English
keywords: Biological Sciences
  type: DefinedTerm
  term code: 106
keywords: Metadata
keywords: Observation
keywords: OCCURRENCE
license: https://creativecommons.org/licenses/by/4.0/
publisher: Swedish Museum of Natural History
version: 0

PropertyValue
property ID: DOI
value: 10.15468/VEAHZB

PropertyValue
property ID: UUID

Swedish Museum of Natural History
type: Organization

Stockholm University
type: Organization

Elzbieta Iwaszkiewicz-Eggebrecht
type: Person
affiliation: Swedish Museum of Natural History

Emma Granqvist
type: Person
affiliation: Swedish Museum of Natural History

Lokeshwaran Manoharan
type: Person
affiliation: Lund University

Lund University
type: Organization

Piotr Łukasik
type: Person
affiliation: Jagiellonian University

Ayco J. M. Tack
type: Person
affiliation: Stockholm University,

Anders F. Andersson
type: Person
affiliation: KTH Royal Institute of Technology

KTH Royal Institute of Technology
type: Organization

Tomas Roslin
type: Person
affiliation: Swedish University of Agricultural Sciences (SLU)

English
type: Language
alternate name: eng