Phenotypic microarray data for three bacterial BCA that were exposed to six different wavelengths
https://doi.org/10.5878/gxa3-aa94
Phenotypic microarray data (PM 1 and PM 2) involving three bacterial strains, Bacillus amyloliquefaciens DSM7, Pseudomonas chlororaphis 58003, Streptomyces griseoviridis CBS904.68, under six light treatments (Darkness, 420, 460, 530, 630, 660 nm at 50 μmol per m2 per second) with six replicates for each. Each csv file is the raw data for one light treatment and all three bacteria. The output is in OmniLog values, which were measured as a colour change of tetrazolium blue due to respiration. Measurements for the dark treatment occurred every 15 min for 96 hours. For the other treatments manual measurements were taken every: 0, 6, 10, 24, 30, 48, 54, 72, and 96 h post inoculation (hpi). Measurements for the light treatments in the OmniLog incubator took one hour. For more information, please see the README file.
Dokumentationsfiler
Dokumentationsfiler
- The power of light Impact on the perfomance of biocontrol agents under minimal nutrient conditions.pdf2.37 MiB
Citering och åtkomst
Citering och åtkomst
Tillgänglighetsnivå:
Skapare/primärforskare:
Forskningshuvudman:
Diarienummer hos huvudman:
- SLU.ltv.2024.4.4.IÄ-16
Data innehåller personuppgifter:
Nej
Citering:
Språk:
Metod och utfall
Metod och utfall
Analysenhet:
Population:
Six replicates of three bacterial strains were exposed to different wavelengths for 96 hours. Readings were set to occur 0, 6, 10, 24, 30, 48, 54, 72, and 96 h post-inoculation (hpi). Output values were expressed in OmniLog units. The darkness treatment had readings every 15 minutes throughout the 96 hours.
Urvalsmetod:
Beskrivning av urval:
Under dark conditions, the colour change was recorded automatically every 15 min, while under light exposure, the colour change of the PM panels was recorded according to previously established growth curves. Readings were set to occur 0, 6, 10, 24, 30, 48, 54, 72, and 96 hours post-inoculation (hpi). Output values were expressed in OmniLog units.
Antal individer/objekt:
108
Dataformat/datastruktur:
Datainsamling - Experiment
Datainsamling - Experiment
Insamlingsmetod:
Experiment
Beskrivning av insamlingsmetod:
Phenotypic microarrays (PM) were performed following procedures described by Gharaie et al. (2017) and Alsanius et al. (2021).
Datainsamlare:
- Swedish University of Agricultural Sciences
Datakälla:
- Forskningsdata
- Forskningsdata: Publicerade
Instrument
Instrument
Namn:
Omnilog
Typ:
Tekniskt/-a instrument
Beskrivning av instrument:
Machine used for microbial phenotypic characterization and identification.
Administrativ information
Administrativ information
Ansvarig institution/enhet:
Institutionen för biosystem och teknologi
Medverkande:
Finansiering
Finansiering
Finansiär:
- Stiftelsen Lantbruksforskning
Öppnar nytt fönster hos ror.org.
ROR
Referensnummer:
R-18-25-006
Projektnamn på ansökan:
Optimized integrated control in greenhouse systems sees the light
Ämnesområde och nyckelord
Ämnesområde och nyckelord
Standard för svensk indelning av forskningsämnen 2025:
Publikationer
Publikationer
Citering:
Karlsson, M. E., Hellström, M., Flöhr, A., Bergstrand, K.-J., & Alsanius, B. W. (2023). The power of light: Impact on the performance of biocontrol agents under minimal nutrient conditions. Frontiers in Microbiology, 14. https://doi.org/10.3389/fmicb.2023.1087639
