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CO1 Amplicon Sequence Variants of soil and leaf litter arthropod communities collected at Malaise traps from the Insect Biome Atlas project in Sweden

https://doi.org/10.15468/783JYB

Amplicon Sequence Variants of 418bp of CO1 from soil and leaf litter arthropod communities collected at Malaise traps from the Insect Biome Atlas project (https://www.insectbiomeatlas.org/Öppnas i en ny tabb) in Sweden, as described in the IBA data paper (https://doi.org/10.1101/2024.10.24.619818Öppnas i en ny tabb) . This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.se/Öppnas i en ny tabb) , and has been updated from 'Metadata only' to 'Occurrence' type. Occurrence data were compiled from the following IBA Figshare items: Processed ASV data from the Insect Biome Atlas Project v3: (https://figshare.scilifelab.se/articles/dataset/Processed_ASV_data_from_the_Insect_Biome_Atlas_Project/27202368/3Öppnas i en ny tabb) - cleaned_noise_filtered_cluster_taxonomy_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067528Öppnas i en ny tabb) - spikeins_tax_SE.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067531Öppnas i en ny tabb) Amplicon sequence variants from the Insect Biome Atlas project v6: (https://figshare.scilifelab.se/articles/dataset/Amplicon_sequence_variants_from_the_Insect_Biome_Atlas_project/25480681/6Öppnas i en ny tabb) - co1_asv_counts_se.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/46381132Öppnas i en ny tabb) - co1_asv_seqs_se.fasta.gz (https://figshare.scilifelab.se/ndownloader/files/46381138Öppnas i en ny tabb) The following samples were excluded from this resource due to sequencing failure: P25259_1390, P25259_1407, P25259_1411, P25259_1420, P25259_1422, P25259_1423, P25259_1428, P25259_1431, P25259_1435, P25259_1436, P25259_1439, P25259_1440, P25259_1444, P25259_1452, P25259_1460, P25259_1467, P25259_1469, P25259_1476, P25259_1591, P25259_1594, P25259_1641, P25259_1649; or lack of non-zero counts for annotated ASVs: P25259_1438, P25259_1455, P25259_1471, P25259_1475, P25259_1586, P25259_1661, P25259_1742.

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Öppnas i en ny tabb
https://doi.org/10.15468/783JYB

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