Fungal ITS2 data from Pyroleae and Monotropa hypopitys germination study
https://doi.org/10.15468/PV9A3T
This dataset contains ITS metabarcoding data describing fungal communities associated with germinating seeds and early developmental stages of Pyroleae species and Monotropa hypopitys in Sweden. The data were generated using high-throughput sequencing of the ITS2 region to characterize ectomycorrhizal fungal diversity and its relationship to plant development and ecological conditions.DescriptionThe dataset originates from a field-based seed sowing experiment designed to investigate fungal associations during early ontogeny of mycoheterotrophic and partially mycoheterotrophic plants (Johansson et al. 2017). Seed bags were deployed across multiple forest sites and retrieved over multiple years to assess germination, seedling development, and associated fungal communities. DNA was extracted from germinated seedlings and analyzed using ITS metabarcoding of the ITS2 region. The resulting dataset includes operational taxonomic units (OTUs), taxonomic assignments, and sequence read abundances, providing a detailed characterization of fungal diversity associated with early plant life stages.PurposeThe purpose of this dataset is to document the diversity and composition of fungal communities associated with early developmental stages of selected plant species and to support research on plant-fungal interactions, mycoheterotrophy, and forest ecosystem processes, building on the findings presented in Johansson et al. 2017, Mol Ecol, 26: 2591-2604. https://doi.org/10.1111/mec.14050Öppnas i en ny tabb
This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.seÖppnas i en ny tabb) .
Gå till källa för data
Öppnas i en ny tabbhttps://doi.org/10.15468/PV9A3T
Citering och åtkomst
Citering och åtkomst
Skapare/primärforskare:
Forskningshuvudman:
Citering:
Språk:
Geografisk täckning
Geografisk täckning
Geografisk beskrivning:
Sampling was conducted on the island of Öland, Sweden, across multiple forest sites including coniferous and mixed forests.
Administrativ information
Administrativ information
Medverkande:
- Ove Eriksson - Stockholm University
- Urmas Kõljalg - University of Tartu
- Leho Tedersoo - University of Tartu
- Mohammad Bahram - Swedish University of Agricultural Sciences
UUID:
d19074ea-f1cf-42ba-9109-e99a5e6a50a5
Ämnesområde och nyckelord
Ämnesområde och nyckelord
Standard för svensk indelning av forskningsämnen 2025:
Nyckelord:
- Monotropa hypopitys
- metabarcoding
- Sweden
- Pyroleae
- dust seeds
- ITS
- mycoheterotrophy
- Occurrence
- ectomycorrhizal fungi
- seedling development
- fungal communities
- OCCURRENCE
Metadata
Metadata
