Data for: Impacts of large herbivores on mycorrhizal fungal communities across the Arctic
https://doi.org/10.5878/zf1c-vz95
Data deposited in association with article to be published in the journal: Ecography. Fungal DNA was extracted from soil samples collected at herbivore exclosure experiments in 15 sites around the Arctic to evaluate the impact of large mammalian herbivores on mycorrhizal fungal communities. The data includes DNA sequence reads amplified using ITS1m-LR5 and SSU515fngs-AML2 long-read primer pairs targeting general fungal sequences and arbuscular mycorrhizae, respectively. Sequences were taxonomically assigned through the UNITE database using PlutoF, and the MaarjAM database and assigned to fungal guild using FUNguild. The pipeline from trimmed, demultiplexed sequence reads to taxonomic and functional assignment is included in the Rscript "EcographySubmission_SynthesisScript.R". Soil properties, date of exclosure establishment, and general metadata is included in the file "MetaData.csv", and percent plant functional type cover is included for 11 sites in the file "Cover_data.csv".
Raw sequence reads were deposited in the Sequence Read Archive (SRA) under the title "Impacts of large herbivores on mycorrhizal fungal communities across the Arctic".
Data files
Data files
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Documentation files
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Citation and access
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Creator/Principal investigator(s):
- Oula Kalttopää - University of Helsinki
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Data contains personal data:
No
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Method and outcome
Method and outcome
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Geographic coverage
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Administrative information
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Topic and keywords
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Publications
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Metadata
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