Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq
https://doi.org/10.17044/SCILIFELAB.12662153
Supplementary information for manuscript: "Improved computational analysis of ribosome dynamics from 5’P degradome data using fivepeseq" from Lilit Nersisyan, Maria Ropat and Vicent Pelechano (2020)
Dataset updated to fivepseq version1.0b6
5'P mRNA degradome datasets analyzed with fivepseq. (http://pelechanolab.com/software/fivepseq). Raw Saccharomyces cerevisiae data is available from GEO under accession code GSE91064 and for Arabidopsis thaliana under accessions GSE72505 and GSE77549.
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https://doi.org/10.17044/SCILIFELAB.12662153
Citation and access
Citation and access
Creator/Principal investigator(s):
- Lilit Nersisyan
- Maria Ropat
Research principal:
Citation:
Administrative information
Administrative information
Funding
Funding
Funding agency:
- European Commission
Opens a new window at ror.org.
ROR
Award number:
845495
Award title:
Ribosomal frameshifts as a novel mechanism to control RNA turnover in stress
Funding agency:
- Swedish Research Council
Opens a new window at ror.org.
ROR
Award number:
2016-01842_VR
Award title:
Impact of transcriptome complexity on gene expression dynamics
Topic and keywords
Topic and keywords
Swedish Standard Classification of Research Subjects 2025:
Keywords:
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