Gene annotation of Linum trigynum

The file contains the genes annotation of Linum trigynum genome. The genome has been deposited to [ENA](https://www.ebi.ac.uk/ena/browser/homeOpens in a new tab) with the accession id: GCA_964030455 (project PRJEB67577). The genes annotation has been done with [TSEBRA](https://github.com/Gaius-Augustus/TSEBRAOpens in a new tab). The genes contained in the S-locus region has been manually annotated using [StringTie](https://ccb.jhu.edu/software/stringtie/Opens in a new tab) and [TransDecoder](https://github.com/TransDecoder/Opens in a new tab). The conversion from gtf to gff3 has been done with [AGAT](https://agat.readthedocs.io/en/latest/index.htmlOpens in a new tab). It is part of this article: Gutiérrez-Valencia, J., Zervakis, P. I., Postel, Z., Fracassetti, M., Losvik, A., Mehrabi, S., ... & Slotte, T. (2024). Genetic causes and genomic consequences of breakdown of distyly in Linum trigynum. Molecular Biology and Evolution, msae087. https://doi.org/10.1093/molbev/msae087Opens in a new tab