CO1 Amplicon Sequence Variants of leaf litter arthropod communities collected at Malaise traps from the Insect Biome Atlas project in Madagascar
https://doi.org/10.15468/PAD7PC
Amplicon Sequence Variants of 418bp of CO1 from leaf litter arthropod communities collected at Malaise traps from the Insect Biome Atlas project (https://www.insectbiomeatlas.orgOpens in a new tab) in Madagascar, as described in the IBA data paper (https://doi.org/10.1038/s41597-025-05151-0Opens in a new tab) .
This dataset was published via the SBDI ASV portal (https://asv-portal.biodiversitydata.seOpens in a new tab) , and has been updated from 'Metadata only' to 'Occurrence' type.
Occurrence data were compiled from the following IBA Figshare items:
Processed ASV data from the Insect Biome Atlas Project v3: (https://figshare.scilifelab.se/articles/dataset/Processed_ASV_data_from_the_Insect_Biome_Atlas_Project/27202368/3Opens in a new tab)
- cleaned_noise_filtered_cluster_taxonomy_MG.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067522Opens in a new tab)
- spikeins_tax_MG.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/50067525Opens in a new tab)
Amplicon sequence variants from the Insect Biome Atlas project v6: (https://figshare.scilifelab.se/articles/dataset/Amplicon_sequence_variants_from_the_Insect_Biome_Atlas_project/25480681/6Opens in a new tab)
- CO1_asv_counts_MG.tsv.gz (https://figshare.scilifelab.se/ndownloader/files/ 49727829Opens in a new tab)
- CO1_asv_seqs_MG.fasta.gz (https://figshare.scilifelab.se/ndownloader/files/46381135Opens in a new tab)
The following samples were excluded from this resource due to sequencing failure: P30904_2718, P30904_2719; or lack of non-zero counts for annotated ASVs:
P30904_2599, P30904_2607, P30904_2592.
Go to data source
Opens in a new tabhttps://doi.org/10.15468/PAD7PC
Citation and access
Citation and access
Geographic coverage
Geographic coverage
Administrative information
Administrative information
Topic and keywords
Topic and keywords
Metadata
Metadata

Swedish Museum of Natural History